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  1. Klebsiella pneumoniae can be cultured in medium with xylose as the sole carbon source. However, the effect of xylose exposure on its growth adaptation, virulence, antimicrobial susceptibility, and proteomic respo...

    Authors: Ruolan Yi, Jiaoyang Zheng, Zhichao Xu, Jiayan Wu, Fangfang Liu, Jinxin Zheng, Duoyun Li, Shiqing Han and Zhijian Yu
    Citation: BMC Microbiology 2025 25:257
  2. Streptococcus pneumoniae is a major cause of invasive and non-invasive diseases, particularly in children and immunocompromised individuals, with an annual mortality of approximately 800,000 children worldwide. T...

    Authors: Zichen Lei, Qi Liu, Yiqun Ma, Xinrui Yang, Hao Zu, Ziyao Li, Feilong Zhang, Dongya Pu, Yulin Zhang and Binghuai Lu
    Citation: BMC Microbiology 2025 25:255
  3. The gut microbiome has been identified as a pivotal factor in ulcerative colitis (UC), given its role as the main reservoir of microbes in the body. This community of microorganisms, present in variable concen...

    Authors: Amjad Ahmadi, Leili Shokoohizadeh, Farshad Sheikhesmaili, Mohammadali Khan Mirzaei, Asadollah Mohammadi, Bahram Nikkhoo, Hakim Khodaei, Mohammad Yousef Alikhani and Rasoul Yousefimashouf
    Citation: BMC Microbiology 2025 25:254
  4. Soil microbes regulate nutrient cycling, organic matter decomposition, and other processes, thereby maintaining soil multifunctionality (SMF). However, the relationship between microbial characteristics and so...

    Authors: Wen Guo, Mai-He Li and Lianghua Qi
    Citation: BMC Microbiology 2025 25:252
  5. Methicillin-resistant Staphylococcus aureus (MRSA) represents a significant global health threat, responsible for infections in both humans and animals. Determining genetic patterns associated with the genome pla...

    Authors: Rusudan Tsiklauri, Saba Kobakhidze, Megi Tsereteli, Lilia Jimsherishvili, Nata Kakabadze, Stylianos Koulouris and Mamuka Kotetishvili
    Citation: BMC Microbiology 2025 25:251
  6. Synbiotic interventions have gained increasing attention for modulating gut microbiota and metabolic functions in obesity-related disorders. This study evaluated the effects of Limosilactobacillus reuteri KUB-AC5...

    Authors: Kevin Mok, Putsawee Tomtong, Takuma Ogawa, Kenshiro Nagai, Pitchsupang Torrungruang, Suvimol Charoensiddhi, Jiro Nakayama, Bandhita Wanikorn, Sunee Nitisinprasert, Wanwipa Vongsangnak and Massalin Nakphaichit
    Citation: BMC Microbiology 2025 25:250
  7. Insect gut fungi, as specialized microorganisms, are a significant source of bioactive compounds. However, there is currently no systematic research on the diversity of gut fungi in Epitheca bimaculata and their ...

    Authors: Kun Kong, Zhe Yan, Mengru Liu, Ye Wang, Zilin Xiang, Caiping Yin and Yinglao Zhang
    Citation: BMC Microbiology 2025 25:249
  8. Leptospirosis is an emerging zoonotic and neglected disease across the world causing huge loss of life and economy. In this study, we did whole genome sequencing of one Leptospira isolate and a comparative genomi...

    Authors: Mohd Abdullah, Mohammad Kadivella, Rolee Sharma, Mirza. S. Baig, Syed M. Faisal and Sarwar Azam
    Citation: BMC Microbiology 2025 25:248
  9. Armillaria gallica establish a unique symbiotic relationship with Gastrodia elata, which is a valuable Chinese herbal plant that relies on this symbiosis. High temperature (HT) seriously affected the growth of bo...

    Authors: Jiao Xu, Xuan Huang, Xiuwen Wang, Shengnan Li, Xiaohong Ou, Qingsong Yuan, Yanhong Wang, Hua He, Weike Jiang and Tao Zhou
    Citation: BMC Microbiology 2025 25:247
  10. In July 2023, Burkholderia gladioli was detected in a patient’s ascites specimen. This pathogen had not been detected in the hospital for nearly 3 years. Therefore, an investigation was immediately launched.

    Authors: Xiao-Jing Li, Lan-Lan Huo, Yong-Jiao Ji, Bo-Wei Liu, Huan Li, Yu Zhou, Yun-Xi Liu and Ming-Mei Du
    Citation: BMC Microbiology 2025 25:246
  11. Virulence factors play an important role in developing bacterial resistance leading to the increased severity of Pseudomonas aeruginosa infections. Several genes encoding for virulence factors is coordinated by t...

    Authors: Mai Hamed Salem, Ahmed F. Azmy, Tarek Dishisha and Nesrein Dessouky
    Citation: BMC Microbiology 2025 25:245
  12. Drowning diagnosis has long been a critical issue in forensic research, influenced by various factors such as the environment and decomposition time. While traditional methods such as diatom analysis have limi...

    Authors: Qin Su, Xiaofeng Zhang, Xiaohui Chen, Zhonghao Yu, Weibin Wu, Qingqing Xiang, Chengliang Yang, Jian Zhao, Ling Chen, Quyi Xu and Chao Liu
    Citation: BMC Microbiology 2025 25:244
  13. Inflammatory events followed by bacterial infections are related to the progression of the atherosclerosis process. The study investigated the signaling and metabolic pathways of endothelial cells (ECs), macro...

    Authors: Reza Ganjali, Mohammad Elahimanesh, Hamidreza Aghazadeh and Mohammad Najafi
    Citation: BMC Microbiology 2025 25:243
  14. Bacterial cellulose (BC) is a nanofibrils macromolecule that possesses unique properties and versatile applications in various fields. For commercial production, agro-industrial wastes were used as sustainable...

    Authors: Doaa A. Hamed
    Citation: BMC Microbiology 2025 25:242
  15. Sulfate-reducing bacteria (SRB) are a major cause of microbially-induced corrosion (MIC) and souring (MIS), leading to significant challenges in industries like oil recovery and wastewater treatment. Due to SR...

    Authors: Guangming Zhang, Zisheng Guo, Shuo Liu, Qiaoli Yang, Yiming Yuan, Ke Guo, Weixiao Wang, Haina Wang, Jie Feng, Wei Chen, Yanmei Sun and Shiwei Wang
    Citation: BMC Microbiology 2025 25:241
  16. During the screening of pigment-producing microbes from domestic sources, 102 yellow- or orange-pigmented bacteria were isolated. Among these, two novel Flavobacterium strains, F. sedimentum SUN046T and F. fluviu...

    Authors: Ye Zhuo, Chun-Zhi Jin, Chang-Soo Lee, Kee-Sun Shin and Hyung-Gwan Lee
    Citation: BMC Microbiology 2025 25:240
  17. Plant-associated microorganisms significantly contribute to plant survival in diverse environments. However, limited information is available regarding the involvement of endophytes in responding to climate ch...

    Authors: Wen-Di Zhang, Yan-Yan Liu, Man-Man Li, Hong Du, Kai-Yuan Huang, Yuan-Yuan Feng, Chang-Wang Ma, Xiao-Xin Wei, Xiao-Quan Wang and Jin-Hua Ran
    Citation: BMC Microbiology 2025 25:239
  18. Providencia species are concerning due to their intrinsic resistance to colistin and tigecycline, complicating the treatment of multidrug-resistant (MDR) infections.

    Authors: Samira M. Hamed, Manal M. Darwish, Reham Monir, Ahmed Al Taweel, Ayat I. Ghanem, Ihab N. Hanna and Mai A. Amer
    Citation: BMC Microbiology 2025 25:238
  19. Antibiotic resistance (AR) has emerged as a significant global health issue. Wastewater treatment plants (WWTPs) contain diverse bacterial communities, including pathogens, and have been identified as crucial ...

    Authors: Evida Poopedi, Rian Pierneef, Tanusha Singh and Annancietar Gomba
    Citation: BMC Microbiology 2025 25:237
  20. Actinomycetes are a diverse group of filamentous, Gram-positive bacteria recognized for their ability to produce various secondary metabolites, including pigments. These pigments have various industrial applic...

    Authors: Daniel Girma, Abu Feyisa, Ebisa Chaluma, Daniel Mulu, Selamawit Geta and Mesfin Tafesse
    Citation: BMC Microbiology 2025 25:236
  21. Carbapenem-resistant P. aeruginosa (CRPA) is a significant nosocomial pathogen characterized by extensive antibiotic resistance, representing a serious public health concern. It is regarded as a high-priority tar...

    Authors: Mohamed Shawky, Mohamed H. Kalaba and Gamal M. El-Sherbiny
    Citation: BMC Microbiology 2025 25:235
  22. Fermented foods can cause adverse effects on human health because of the biogenic amines (BAs) accumulating through amino acid decarboxylation. This study investigated the presence of BAs including tyramine an...

    Authors: Obeid Shanab, Faten Fareed, Ahmed Y. Nassar, Hanan H. Abd-Elhafeez, Ahmed Shaban Ahmed and Mona A. El-Zamkan
    Citation: BMC Microbiology 2025 25:234
  23. Lower respiratory tract infections are frequently caused by bacteria, and the rapid identification of pathogens is crucial for guiding treatment. Multiplex PCR(M-PCR) can detect multiple pathogens simultaneous...

    Authors: Yanjun Chang, Ting Li, Yanfang Niu, Xiaodong Guan and Yarong Xie
    Citation: BMC Microbiology 2025 25:233
  24. Mythimna separata, the oriental armyworm, is a lepidopteran pest that threatens cereal crops. In the current study, two strains (XSBN200920 and JHML200710) of entomopathogenic fungus Metarhizium rileyi were teste...

    Authors: Yuejin Peng, Xv Zhang, Guang Wang, Zhengfei Li, Xinling Lai, Baoyun Yang, Bin Chen and Guangzu Du
    Citation: BMC Microbiology 2025 25:232
  25. Brucella spp. is a zoonotic pathogen that affects both livestock and humans, causing reproductive issues in animals and severe health complications in humans, including undulant fever, hepatomegaly, and arthritis...

    Authors: Shaista Zeb, Humaira Yasmin, Imran Riaz Malik, Mohammad Abul Farah, Vivak M. Arya and Muhammad Nadeem Hassan
    Citation: BMC Microbiology 2025 25:231
  26. Plant diseases significantly and persistently impair product quality and yield across the globe. Employing antagonistic microorganisms represents an environmentally friendly and cost-effective approach to path...

    Authors: Dongying Zhao, Yutong Wu, Jie Qu, Lei Fang, Chaoyue Liu, Lin Zhang, Mingshuo Zhang, Jihua Wang and Zhenghua Li
    Citation: BMC Microbiology 2025 25:230
  27. For last seven decades we remained convinced that the natural point mutations occur randomly in the genome of an organism. However, our whole genome sequence analyses show that for the gastric pathogen Helicobact...

    Authors: R. J. Retnakumar, Prakash Chettri, Sangey Chhophel Lamtha, K. C. Sivakumar, Priya Dutta, Pahil Sen, Sanjit Biswas, Nikita Agarwal, Angitha N. Nath, T. Barani Devi, Namrata Thapa, Jyoti Prakash Tamang and Santanu Chattopadhyay
    Citation: BMC Microbiology 2025 25:229
  28. Canine atopic dermatitis (cAD) is a chronic inflammatory disease that significantly reduces the quality of life in dogs. Dysbiosis of the gut microbiota affects skin diseases through the gut–skin axis. Therefo...

    Authors: Hyokeun Song, Seung-Hyun Mun, Dae-Woong Han, Jung-Hun Kang, Jae-Uk An, Cheol-Yong Hwang and Seongbeom Cho
    Citation: BMC Microbiology 2025 25:228
  29. Avian pathogenic Escherichia coli (APEC) threatens both poultry production and human health. Xylooligosaccharides (XOS) may suppress pathogenic bacteria through prebiotic actions. However, the influences of singl...

    Authors: Lulu Ren, Qingyun Cao, Hui Ye, Zemin Dong, Changming Zhang, Fei Yan, Yuping Zhou, Huiyun Zhou, Jianjun Zuo and Weiwei Wang
    Citation: BMC Microbiology 2025 25:227
  30. Emerging evidence suggests that changes in the blood microbes might be associated with cardiovascular disease, especially myocardial infarction (MI). However, some researchers are questioning whether a true “b...

    Authors: Ikram Khan, Imran Khan, Ping Xie, Yu Xiaohui, Shengnan Lei, Tianzhu Song, Zhiqiang Li and Xiaodong Xie
    Citation: BMC Microbiology 2025 25:226
  31. Hemorrhagic septicemia is a highly fatal disease of cattle caused by the bacteria; Pasteurella multocida serotypes B and E in Asia and Africa respectively. Even though the capsular serotype E is considered to be ...

    Authors: Zemenu Bitew, Takele Abayneh Tefera, Yosef Deneke, Tsegaye T/mariam and Fanuel Bizuayehu Yihunie
    Citation: BMC Microbiology 2025 25:224
  32. Staphylococcus aureus is a causative agent of diseases ranging from skin and soft tissue infections to several other invasive diseases such as bacteraemia, osteomyelitis, and pneumonia, as well as various non-inv...

    Authors: Hardi Patel, Aakruti Patel, Ravi Chauhan, Toral Bhavsar, Sanjay Rathod, Mina Kadam, Anurag Rawat and Seema Rawat
    Citation: BMC Microbiology 2025 25:223
  33. Understanding the temporal variability of the microbiome is critical for translating associations of the microbiome with health and disease into clinical practice. The aim of this study is to assess the extent...

    Authors: Vojtěch Tláskal, Jan Hrbáček, Vítězslav Hanáček, Petra Baránková, Pavel Čermák, Roman Zachoval and Priscila Thiago Dobbler
    Citation: BMC Microbiology 2025 25:222
  34. Urinary tract infections (UTIs) caused by antibiotic-resistant bacteria have become a significant public health concern. The increasing ineffectiveness of antibiotics has led to a renewed focus on investigatin...

    Authors: Assmaa H. Hussein, Salsabil Makky, Raghda Hager, Ian F. Connerton and Ayman El-Shibiny
    Citation: BMC Microbiology 2025 25:221
  35. The bacterial second messenger c-di-GMP is known to influence the formation of biofilms and thereby persistence of pathogenic and beneficial bacteria in hosts. A previous evolution experiment with Pseudomonas lur...

    Authors: Anna Czerwinski, Julia Löwenstrom, Sören Franzenburg, Espen Elias Groth, Nancy Obeng and Hinrich Schulenburg
    Citation: BMC Microbiology 2025 25:220
  36. The genus Streptomyces has been recently proven to be a valuable and rich source of producing several bioactive compounds with substantial biological activity and applications in many fields such as medicine, env...

    Authors: Mervat G. Hassan, Mohamed O. Abdel-Monem, Al Shaimaa M. A. Sleem, Mohamed E. El Awady and Ahmed A. Hamed
    Citation: BMC Microbiology 2025 25:219
  37. Carbapenem-resistant Pseudomonas aeruginosa (CRPA) constitutes a serious source of global healthcare-associated infections, and the exploration of its resistance mechanism represents an important approach to addr...

    Authors: Maofeng Wang, Yuxiao Zhang, Fengyan Pei, Ying Liu and Yan Zheng
    Citation: BMC Microbiology 2025 25:218
  38. Carbapenem-resistant Klebsiella pneumoniae (CRKP) represents a significant global threat due to its high prevalence rates and limited therapeutic options. The primary objective of this study was to investigate th...

    Authors: Xindi Wang, Jinwen Wang, Xudong Jiang, Zhuoyan Huang, Liji Huang, Qing Wei and Lina Zhang
    Citation: BMC Microbiology 2025 25:217
  39. Acinetobacter baumannii is a major pathogen in hospitals, causing a notable rise in bloodstream infections among inpatients. Its growing resistance to multiple drugs limits treatment options. This study aims to e...

    Authors: Zhuocheng Yao, Kaihang Yu, Changrui Qian, Beibei Zhou, Yishuai Lin, Xiaodong Zhang, Ying Zhang, Tieli Zhou, Weiliang Zeng, Jianming Cao and Yao Sun
    Citation: BMC Microbiology 2025 25:216
  40. Contemporary poultry farming involves extensive antibiotic use, which could potentially pose health risks to consumers through antibiotic residues in animal-derived food products, especially meat. Recent decis...

    Authors: Hassna Jaber, Daniel Jesuwenu Ajose, Nabil Fikraoui, Nouhaila Zaazoui, Débora Brito Goulart, Brahim Bourkhiss, Collins Njie Ateba and Mohammed Ouhssine
    Citation: BMC Microbiology 2025 25:215
  41. The establishment of synthetic microbial communities comprising complementary auxotrophic strains requires efficient transport processes for common goods. With external supplementation of the required metaboli...

    Authors: Rico Zuchowski, Simone Schito, Christina Mack, Astrid Wirtz, Michael Bott, Tino Polen, Stephan Noack and Meike Baumgart
    Citation: BMC Microbiology 2025 25:214
  42. Selenium-enriched yeast (SeY), a high-quality organic source of selenium, enhances antioxidant activity and intestinal health in swine. This study aims to evaluate the effects of varying dietary SeY levels on ...

    Authors: Lingling Su, Hongbo Yi, E Xu, Mingfei Xiao and Yanhua Gao
    Citation: BMC Microbiology 2025 25:213
  43. Antimicrobial resistance (AMR) poses a significant threat to global health, exacerbated by the protective mechanisms of biofilms formed by drug-resistant bacteria. Extracellular polymeric substances (EPS) prod...

    Authors: Samiur Rahim, Reazur Rahman, Tania Akter Jhuma, Mustak Ibn Ayub, Shakila Nargis Khan, Ashfaque Hossain and Muhammad Manjurul Karim
    Citation: BMC Microbiology 2025 25:212
  44. Niviventer, a rodent species widely distributed in Asian forests, serves as a significant reservoir for pathogens. Bordetella pseudohinzii(B. pseudohinzii), a recently identified Bordetella species with unclear p...

    Authors: Jian Zhou, Sha Mao, Ying Liu, Tao Gu, Jingzhu Zhou, Fengming Chen, Yong Hu and Shijun Li
    Citation: BMC Microbiology 2025 25:211
  45. Mastitis is one of the primary causes of economic and production losses in the dairy cattle industry. Bacterial infections are the most significant contributors to bovine mastitis, with Staphylococcus species amo...

    Authors: Dessie Debeb Getahun, Habtamu Tassew Tarekegn, Bizuneh Tsehayneh Azene, Laikemariam Teshome Abebe, Mequanint Addisu Belete and Tesfaye Sisay Tessema
    Citation: BMC Microbiology 2025 25:210
  46. Antibiotic resistance against human pathogenic bacteria is a global problem and the issue is becoming increasingly serious. Klebsiella aerogenes, a Gram-negative pathogen, is usually found in soil and water, but ...

    Authors: Tansha Kabir, Md. Ismail Hossain, Tangerul A. Jepu, Mrinmoy Sarker, Nusrat U. A. Saleh, Hafsa Monir, Nafisa Nawaar, Sadia A. Jene, Md Mahtab Hossain, M. Aftab Uddin, M. Latiful Bari and Muktadir S. Hossain
    Citation: BMC Microbiology 2025 25:209
  47. Brucellosis poses a severe threat to public health in Northwest China; however, the genome phylogeny and transmission pattern of Brucella melitensis from sheep and yaks in this region remain unclear. In this stud...

    Authors: Xiaoan Cao, Ping Liu, Jinyan Wu, Zhijie Liu, Yuling Zhang, Cai Yin, Lan Ying, Jinrui Ma, Jijun He, Youjun Shang, Rui Du, Zhiguo Liu and Zhenjun Li
    Citation: BMC Microbiology 2025 25:208

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