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  1. This study was conducted to develop a cost-effective and environmentally friendly biofertilizer by utilizing chicken feather waste. Two bacterial strains were employed to biotransform the abundant keratin prot...

    Authors: Iqra Saleem, Wajeeha Asad, Tabbasum Kiran, Sabahat Binte Asad, Sana Khaliq, Amira Ali Mohammed Al-Harethi, L. O. Mallasiy and Tawaf Ali Shah
    Citation: BMC Microbiology 2025 25:207
  2. Pseudomonas aeruginosa can proliferate in immunocompromised individuals, forming biofilms that increase antibiotic resistance. This bacterium poses a significant global health risk due to its resistance to human ...

    Authors: Lamiaa A. Al-Maddboly, Mohamed Abd El-Salam, Jairo K. Bastos, Eiman A. Hasby, Ivan Kushkevych and Rasha M. El-Morsi
    Citation: BMC Microbiology 2025 25:206
  3. Recent years have witnessed increasingly extensive application of microbial fertilizers in agriculture. However, the effectiveness of microbial fertilizers remains inconsistent because of the significant effec...

    Authors: Xia Deng, Wenwen Liu, Peng Huang, Yunge Zhang, Sasa Zhang, Yanbin Guo, Shifang Wu and Ziwei Jiao
    Citation: BMC Microbiology 2025 25:205
  4. The mammalian gut microbiota is a complex microbial community with diverse impacts on host biology. House mice (Mus musculus) are the major model organism for research on mammals, but laboratory domestication has...

    Authors: Eveliina Hanski, Susan Joseph, Michael A. Curtis, James W. Swann, Marie Vallier, Miriam Linnenbrink, John F. Baines, Jens-Kjeld Jensen, Andrew Wolfenden, Iris Mair, Kathryn J. Else, Janette E. Bradley, Wieteke Holthuijzen, Jonathan H. Plissner, Aura Raulo, Maude Quicray…
    Citation: BMC Microbiology 2025 25:204
  5. Pseudomonas aeruginosa is a major pathogen in cystic fibrosis (CF), where chronic and intermittent infections significantly affect patient outcomes. This study aimed to investigate the molecular epidemiology of P...

    Authors: Maria Isabel Montoril Gouveia, Edilene do Socorro Nascimento Falcão Sarges, Herald Souza dos Reis, Danielle Melo Sardinha, Pabllo Antonny Silva dos Santos, Layana Rufino Ribeiro, Marcos Jessé Abrahão Silva, Marcos Vinicios Hino de Melo, Ana Judith Pires Garcia Quaresma, Danielle Murici Brasiliense, Luana Nepomuceno Godim Costa Lima, Karla Valéria Batista Lima and Yan Corrêa Rodrigues
    Citation: BMC Microbiology 2025 25:203
  6. Variation in gastric cancer (GC) incidence across different geographic areas persists, even when there are similar prevalence rates of Helicobacter pylori (H. pylori) infection. An extensive examination of the ga...

    Authors: Liying Lin, Wanxin Li, Lingjun Yan, Xiaoxiong Guo, Mingkai Zhuang, Fenglin Chen and Weimin Ye
    Citation: BMC Microbiology 2025 25:202
  7. Enterotoxigenic Escherichia coli (ETEC) is responsible for piglet diarrhea and causes substantial economic loss in the pig industry. Along with the restriction of antibiotics, natural compounds targeting bacteria...

    Authors: Yaqian Shi, Jin Liu, Hualin Zhou, Zhongyuan Wu, Yinsheng Qiu and Chun Ye
    Citation: BMC Microbiology 2025 25:201
  8. The emergence of antimicrobial resistance (AMR) in Escherichia coli, particularly extended-spectrum beta-lactamase-producing E. coli (ESBL-EC), is a global public health concern. Bacteriophages (phages) play a si...

    Authors: Mabel Kamweli Aworh, Opeyemi U. Lawal, Beverly Egyir and Rene S. Hendriksen
    Citation: BMC Microbiology 2025 25:200
  9. This study aims to investigate the molecular biological characteristics of a ceftazidime-avibactam resistant Klebsiella pneumoniae strain isolated from a tertiary care hospital in China.

    Authors: Yanye Tu, Hui Gao, Feng Wang, Rongqing Zhao, Shiyong Chen, Yanzi Chang and Hong Li
    Citation: BMC Microbiology 2025 25:199
  10. Although hot pepper contributes significantly to Ethiopia’s national economy, its production is hindered by devastating outbreaks of phytopathogens such as Fusarium wilt and Meloidogyne incognita disease complexe...

    Authors: Shiferaw Demissie Tola, Diriba Muleta, Fassil Assefa, Farideh Ghadamgahi, Ramesh Raju Vetukuri and Beira Hailu Meressa
    Citation: BMC Microbiology 2025 25:198
  11. Culture-negative periprosthetic joint infections (CN-PJIs) represent a critical subtype of PJI, and their high prevalence poses substantial challenges for treatment. CN-PJI is commonly managed utilizing antibi...

    Authors: Liqin Yao, Youcai Ma, Rui Liu, Yicheng Li, Xuebin Sun, Tuerhongjiang Wahafu, Li Cao and Wenbo Mu
    Citation: BMC Microbiology 2025 25:197
  12. Phyllosphere microbiome plays a crucial role in maintaining plant fitness. However, its response to changes in dominant tree species during forest succession still remains poorly understood.

    Authors: Zi-wen Gao, Zheng-ning Xu, Yi-lin Li, Lin Chang, Ning Li, Yang-chun-zi Liao, Wen-jing Meng, Hui Sun and Lin Huang
    Citation: BMC Microbiology 2025 25:195
  13. Avian colibacillosis, caused by avian pathogenic Escherichia coli (APEC), remains one of the most significant bacterial diseases threatening global poultry production and causing substantial economic losses. The ...

    Authors: Lunbin Xia, Guanglei Wang, Naidong Chen, Deliang Qiao, Jianwen Cao and Shaoshuai Bi
    Citation: BMC Microbiology 2025 25:194
  14. The reciprocal relationship between aging and alterations in the gut microbiota is a subject of ongoing research. While the role of bacteria in the gut microbiome is well-documented, specific changes in the co...

    Authors: Rokhsareh Mohammadzadeh, Alexander Mahnert, Tejus Shinde, Christina Kumpitsch, Viktoria Weinberger, Helena Schmidt and Christine Moissl-Eichinger
    Citation: BMC Microbiology 2025 25:193
  15. The emergence of carbapenem resistance in gram-negative bacteria such as Escherichia coli is one of the world’s most urgent public health problems. E. coli, which encounter a diverse range of niches in host can r...

    Authors: Chandrayee Deshamukhya, Sabnam Ahmed, Bhaskar Jyoti Das, Debadatta Dhar Chanda and Amitabha Bhattacharjee
    Citation: BMC Microbiology 2025 25:192
  16. Based on the microbiota–gut–brain axis (MGBA) hypothesis, probiotics play an increasingly important role in treating various psychiatric disorders. Schizophrenia (SCZ) is a common mental disease with a complex...

    Authors: Liqin Zheng, Jinge Xin, Huiqian Ye, Ning Sun, Baoxing Gan, Xuemei Gong, Shusheng Bao, Min Xiang, Hesong Wang, Xueqin Ni, Hao Li and Tao Zhang
    Citation: BMC Microbiology 2025 25:191
  17. The unique flavour and quality of Baijiu, a treasure of traditional Chinese culture, has attracted increasing attention. The pit mud is a key component for forming the unique flavour styles of different Baijiu...

    Authors: Lianbin Cao, Hongmei Sun, Ziyi Xu, Xiaoxiao Xu, Guangchuan Shi, Jianqiang Zhang, Changli Liang, Tongbiao Li, Chaoying Liu, Mingcheng Wang, Shilin Tian and Enzhong Li
    Citation: BMC Microbiology 2025 25:190
  18. In vitro studies have demonstrated the modulation of vaginal microbiota (VM) by cervical peptides which levels varied with the status of HPV infection and cervical intraepithelial neoplasia (CIN) grades. Howev...

    Authors: Wenkui Dai, Yu Liu, Xin Jiang, Ruinan Xu, Chunlei Guo, Jun Hou, Di Wu, Changzhong Li, Hui Du and Ruifang Wu
    Citation: BMC Microbiology 2025 25:189
  19. The increasing prevalence of multidrug-resistant tuberculosis (MDR-TB) highlights the urgent need for an efficient approach to identify Mycobacterium tuberculosis complex (MTBC) strains resistant to rifampicin...

    Authors: Guohui Xiao, Houming Liu, Hui Xu, Hongyu Shi, Dongxin Liu, Min Ou, Peng Liu and Guoliang Zhang
    Citation: BMC Microbiology 2025 25:188
  20. Leishmaniasis is a disease caused by the Leishmania parasite. Recent studies suggest a critical role for double-stranded RNA virus (LRV) in the disease outcome. MicroRNAs (miRs) are small, non-coding RNA molecule...

    Authors: Zahra Mirabedini, Mehdi Mohebali, Hamed Mirjalali, Homa Hajjaran, Fatemeh Goudarzi and Hanieh Mohammad Rahimi
    Citation: BMC Microbiology 2025 25:187
  21. Industrial waste, agricultural runoff and untreated sewage contaminate the Nile, leaving a toxic legacy in its sediments. Organohalides-polluted sediment in particular poses serious public health risks and det...

    Authors: Hwayda Soliman, Mohamed Ismaeil, Hoda Soussa and Wael S. El-Sayed
    Citation: BMC Microbiology 2025 25:186
  22. In the face of global warming, the Eothenomys miletus (Red - backed vole), a species dwelling in highland mountainous regions, is likely to encounter difficulties. Given its restricted mobility, it may struggle w...

    Authors: Ting Jia, Wei Zhang, Wanlong Zhu and Lixian Fan
    Citation: BMC Microbiology 2025 25:185
  23. Livestock-associated Staphylococcus aureus ST398 is a highly pathogenic species that causes infections in a wide variety of animals, including humans. The bacteriophage (phage) vB_SauS_S1 was isolated originally ...

    Authors: Hui Liu, Craig Billington, Xing Ji, Haichang Sun, Xiang Hou, Abbas Soleimani-Delfan, Ran Wang, Heye Wang and Lili Zhang
    Citation: BMC Microbiology 2025 25:184
  24. Carbapenem-resistant Escherichia coli (CREC) is one of the most significant clinical pathogens, primarily emerging owing to the widespread use of broad-spectrum antibiotics. Antimicrobial resistance is a major gl...

    Authors: Jingchun Kong, Yue Wang, Yan Liu, Weijun Chen, Yijia Han, Huijing Zhou, Xiaodong Zhang, Beibei Zhou, Tieli Zhou and Jiayin Zheng
    Citation: BMC Microbiology 2025 25:183
  25. Human brucellosis is a severe public health threat in Xinjiang; however, the epidemiological evolution and molecular correlation of strains are still unclear. In this study, join point regression analysis, spa...

    Authors: Zhiguo Liu, Bo Li, Chuizhao Xue, Min Yuan, Zhenjun Li, Junling Sun and Canjun Zheng
    Citation: BMC Microbiology 2025 25:181
  26. Rumen microbial community structure and stability are very important for ruminant health, growth and development, and livestock product yield. Dietary composition and nutritional structure affect microbial div...

    Authors: Xiaoyun Zhang, Xulei Liu, Kaili Xie, Yueting Pan, Fuyao Liu and Fujiang Hou
    Citation: BMC Microbiology 2025 25:180
  27. Streptococcus suis (S. suis) is a major zoonotic pathogen that infects humans and pigs. The increasing emergence and dissemination of antibiotic resistance bacteria accelerates the urgent need to develop novel dr...

    Authors: Ting Gao, Tingting Li, Jiajia Zhu, Linlin Zheng, Mo Chen, Wei Liu, Keli Yang, Tengfei Zhang, Fangyan Yuan, Zewen Liu, Rui Guo, Chang Li, Qiong Wu, Yongxiang Tian, Rui Zhou and Danna Zhou
    Citation: BMC Microbiology 2025 25:179
  28. Acinetobacter baumannii, a Gram-negative bacterium, is a public health threat due to its role in nosocomial infections and increasing antibiotic resistance. In Nigeria, data on the molecular epidemiology of A. ba...

    Authors: Samuel O. Ajoseh, Abdul-Azeez A. Anjorin, Wasiu O. Salami, Hanka Brangsch, Heinrich Neubauer, Gamal Wareth and Kabiru O. Akinyemi
    Citation: BMC Microbiology 2025 25:178
  29. In winter, tea plants are highly susceptible to low-temperature freezing damage. The rapid recovery of tea plant vigor in spring is crucial for tea yield and quality. Some studies have reported that Bacillus muci...

    Authors: Xiao Han, Yaozong Shen, Litao Sun, Jiazhi Shen, Yilin Mao, Kai Fan, Shuangshuang Wang, Zhaotang Ding and Yu Wang
    Citation: BMC Microbiology 2025 25:177
  30. Congenital hepatic fibrosis (CHF) caused by mutations in the polycystic kidney and hepatic disease 1 (PKHD1) gene is a rare genetic disorder with poorly understood pathogenesis. We hypothesized that integrating g...

    Authors: Mengfan Jiao, Ye Sun, Zixing Dai, Xiaoxue Hou, Xizhi Yin, Qingling Chen, Rui Liu, Yuwen Li and Chuanlong Zhu
    Citation: BMC Microbiology 2025 25:176
  31. Fluoroquinolones and aminoglycosides are potential treatment choices in the setting of increasingly multi-drug resistant Enterobacterales. The Clinical & Laboratory Standards Institute (CLSI) breakpoints for fluo...

    Authors: Zahra N. Sohani, Anthony Lieu, Makeda Semret, Matthew P. Cheng, Nancy Simic, Reggie Bamba, Mina Patel, Alexander Lawandi and Todd C. Lee
    Citation: BMC Microbiology 2025 25:175
  32. This study investigates the prevalence, antimicrobial resistance, genotypic resistance profiles, and virulence gene distribution of Salmonella isolates from poultry and beef processing environments in Shahrekord,...

    Authors: Zahra Osivand, Ebrahim Rahimi, Amir Shakerian and Faham Khamesipour
    Citation: BMC Microbiology 2025 25:174
  33. Over the past ten years, the prevalence of the OqxAB efflux pump, a plasmid-mediated quinolone resistance determinant, has increased among Escherichia coli (E. coli) isolates. The aim of this study was to genotyp...

    Authors: Kholoud Baraka, Rania Abozahra, Fatma Okda and Sarah M. Abdelhamid
    Citation: BMC Microbiology 2025 25:171
  34. The co-occurrence of sporocarps has revealed many intimate associations between different ectomycorrhizal (ECM) fungi species. The co-occurrence of sporocarps of Suillus bovinus and Gomphidius roseus, two edible ...

    Authors: Deng Li, Guiyun Yuan and Xueguang Sun
    Citation: BMC Microbiology 2025 25:170
  35. We engineered novel T5-like bacteriophage (phage) with extended host ranges by editing the long-tail fibers (PB3 and PB4) to combat Salmonella Enteritidis. By replacing the long-tail fibers PB3 and PB4 regions of...

    Authors: Xiaofeng Zheng, Xin Wang, Pei Li, Yu Zhou, Xihui Zhu, Zimeng Hu, Hui Wang, Mianmian Chen, Xiang Huo, Yingyu Liu and Wei Zhang
    Citation: BMC Microbiology 2025 25:169
  36. Ulcerative colitis (UC) is an intestinal disease caused by many factors that seriously harms the health of humans and animals. Probiotics are currently widely used to treat intestinal inflammation; however, di...

    Authors: Jianlong Lao, Man Chen, Shuping Yan, Han Gong, Zhaohai Wen, Yanhong Yong, Dan Jia, Shuting Lv, Wenli Zou, Junmei Li, Huiming Tan, Hong Yin, Xiangying Kong, Zengyuan Liu, Fucheng Guo, Xianghong Ju…
    Citation: BMC Microbiology 2025 25:168
  37. Acinetobacter baumannii is an obligately aerobic, non-motile, non-fermenting, gram-negative, opportunistic pathogen. The fact that this pathogen, which is the leading cause of nosocomial infections, is naturally ...

    Authors: Merve Ataman and Berna Özbek Çelik
    Citation: BMC Microbiology 2025 25:167
  38. Infectious etiologies of deep neck space abscess (DNSA) by conventional culture tests can be challenging, which also leads to frequent irrational antibiotic usage. Metagenomic next-generation sequencing (mNGS)...

    Authors: Han Lei, Jiarui Liao, Yu Lin, Tianrun Liu, Wenbin Lei and Wenxiang Gao
    Citation: BMC Microbiology 2025 25:166
  39. This study aims to evaluate and compare the effectiveness of metagenomic next-generation sequencing (mNGS) in identifying pathogens from clinical body fluid samples, with a specific focus on the application of...

    Authors: Ning Sun, Jiaxun Zhang, Wentao Guo, Jin Cao, Yong Chen, Deyu Gao and Xinyi Xia
    Citation: BMC Microbiology 2025 25:165
  40. Wolbachia pipientis is an intracellular endosymbiotic bacterium that blocks the replication of several arboviruses in transinfected Aedes aegypti mosquitoes, yet its antiviral mechanism remains unknown. For the f...

    Authors: Michael Leitner, Valentine Murigneux, Kayvan Etebari and Sassan Asgari
    Citation: BMC Microbiology 2025 25:164
  41. Dengue Virus (DENV) is a life-threatening pathogen leading to dengue fever, which brings about huge public health challenges globally. However, traditional detection methods currently fail to meet the increasi...

    Authors: Yunkai Zhang, Yan Xiang, Dengyong Hou, Liben Fang, Shuqi Cai, Jianping Zhang, Yujia Wang, Yuyu Jiang, Bin Liu, Jie Bai, Yue Ding, Jingjing Fang, Shuanghong Chen, Xingguang Liu and Xiaomeng Ren
    Citation: BMC Microbiology 2025 25:163
  42. The emergence of antimicrobial resistance (AMR) is a global menace to both public and animal health sectors with devastating effects in developing countries. Indiscriminate use of antibiotics in human health a...

    Authors: Kizito M. Muwonge, Hellen Ndagire, Julius Mulindwa and Charles Kakuhikire Twesigye
    Citation: BMC Microbiology 2025 25:162
  43. Aminoglycosides are important broad-spectrum antimicrobial agents. When combined with β-lactam drugs, these agents can be used to treat severe infections such as those causing sepsis. Identifying additional re...

    Authors: Junwan Lu, Jing Wang, Mengdi Gao, Kexin Zhou, Jialei Liang, Chunhan Song, Xuying He, Chaoqun Liu, Huiyue Feng, Wei Pan, Qiyu Bao, Chunxia Yan and Dawei Huang
    Citation: BMC Microbiology 2025 25:161
  44. Extremophilic fungi thrive in extreme environments, revealing life’s origins and enhancing biodiversity while offering insights into evolutionary biology. This study investigates the adaptation mechanisms of h...

    Authors: Noura I. Farouk, Shadia M. Sabry, Asmaa M. Elhosainy and Magda A. El-Meleigy
    Citation: BMC Microbiology 2025 25:160
  45. Leptosphaeria maculans is a fungal pathogen causing stem canker of oilseed rape (Brassica napus). The disease is mainly controlled by the deployment of varieties with major resistance genes (Rlm). Rlm genes can r...

    Authors: Angélique Gautier, Valérie Laval and Marie-Hélène Balesdent
    Citation: BMC Microbiology 2025 25:159
  46. The primary infectious foot diseases in cattle, bovine foot rot (BFR) and bovine digital dermatitis (BDD), commonly associated with Fusobacterium necrophorum and Treponema spp., respectively, are considered polyb...

    Authors: Susan Pyakurel, Benjamin Jordan Caddey, Angelica Petersen Dias, Jeroen De Buck, Douglas Walter Morck and Karin Orsel
    Citation: BMC Microbiology 2025 25:158

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