Changes of intestinal microbiome and its relationship with painful diabetic neuropathy in rats

BMC Microbiology

Table 1 The sequences information of fecal samples

Group	Sample ID	Insert size (bp)	Seq strategy	Raw reads (#)	Raw base(GB)	%GC	Raw Q20(%)	Raw Q30(%)	Clean reads (#)	Cleaned (%)	Clean Q20(%)	Clean Q30(%)
C	sample06	350	(150:150)	25332384	7.60	46	98.94	96.71	23881537	94.27	99.50	98.04
C	sample07	350	(150:150)	22318964	6.70	43	98.60	95.66	20232565	90.65	99.41	97.64
C	sample08	350	(150:150)	22208130	6.66	47	98.99	96.78	21306543	95.94	99.49	98.02
C	sample09	350	(150:150)	27048328	8.11	47	98.93	96.66	25929266	95.86	99.48	97.98
C	sample10	350	(150:150)	23483734	7.05	46	98.95	96.70	22482797	95.74	99.48	97.99
PDN	sample11	350	(150:150)	23956733	7.19	46	98.87	96.43	22711541	94.80	99.48	97.94
PDN	sample12	350	(150:150)	22804339	6.84	41	98.66	95.83	20852234	91.44	99.34	97.54
PDN	sample13	350	(150:150)	23876928	7.16	45	98.93	96.59	22865452	95.76	99.47	97.92
PDN	sample14	350	(150:150)	30532576	9.16	49	98.94	96.67	29076088	95.23	99.48	97.96
PDN	sample15	350	(150:150)	24248125	7.27	49	98.90	96.53	23154873	95.49	99.47	97.91

Sample ID: Sample name; Insert Size (bp): The insert size refers to the length chosen during library preparation when cutting the gel. An appropriate insert size can prevent contamination from sequencing adapters; Seq Strategy: Sequencing strategy (typically paired-end, each 150 bp); Raw Reads (#): The number of raw reads obtained from sequencing; Raw Base (GB): The total base number of raw reads, expressed in gigabytes (GB). It is calculated by multiplying the raw reads count by the sequencing length; %GC: The percentage of G/C bases relative to the total number of bases; Clean Reads (#): The number of clean reads obtained after filtering (quality control and removal of host sequences); Cleaned (%): The percentage of remaining sequences after filtering, relative to the total raw reads; Q20: The percentage of bases with a quality score greater than 20; Q30: The percentage of bases with a quality score greater than 30.

ISSN: 1471-2180