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Table 2 Phage-Associated virulence genes detected in ESBL Escherichia coli isolated from all sources identified using VFDB

From: In silico genomic insights into bacteriophages infecting ESBL-producing Escherichia coli from human, animal, and environmental sources

Virulence genes

Overall

N = 26 (%)

Abattoir Workers

N = 13 (%)

Beef Cattle

N = 11 (%)

Abattoir Environment N = 2 (%)

gtrA

5 (19.2)

2 (15.4)

3 (27.2)

0 (0)

fimB

5 (19.2)

2 (15.4)

2 (18.2)

1 (50)

fimE

4 (15.4)

1 (7.7)

2 (18.2)

1 (50)

gndA

1 (3.8)

0 (0)

1 (9.1)

0 (0)

ugd

4 (15.4)

3 (23.1)

1 (9.1)

0 (0)

galF

3 (11.5)

2 (15.4)

1 (9.1)

0 (0)

KP1_RS17355

1 (3.8)

0 (0)

1 (9.1)

0 (0)

espL1

3 (11.5)

3 (23.1)

0 (0)

0 (0)

  1. VFDB Virulence Factor Database